| Name | Version | Summary | date |
| cooler |
0.10.3 |
Sparse binary format for genomic interaction matrices. |
2024-12-21 02:13:17 |
| nf-core |
3.1.1 |
Helper tools for use with nf-core Nextflow pipelines. |
2024-12-20 13:00:23 |
| ensembl-genomio |
1.6.0 |
Ensembl GenomIO -- pipelines to convert basic genomic data into Ensembl cores and back to flatfile |
2024-12-19 15:09:17 |
| roma-analysis |
0.1.5 |
Representation and Quantification of Module Activity for bulk and single cell transcriptomics in python |
2024-12-19 10:22:34 |
| cogent3 |
2024.12.19a1 |
COmparative GENomics Toolkit 3: genomic sequence analysis within notebooks or on compute systems with 1000s of CPUs. |
2024-12-19 03:33:36 |
| singlecell-cookbook |
0.3.1 |
A collection of tools for analyzing single-cell genomics data. |
2024-12-19 00:53:42 |
| sigmap |
1.1.1 |
SigmaP: Python package for predicting sigma70 promoter in Escherichia coli K-12 |
2024-12-17 13:50:28 |
| bioat |
0.13.5 |
bioat, a python package & command line toolkit for Bioinformatics and data science! |
2024-12-17 03:25:58 |
| CNSistent |
0.7.1 |
Tools for imputation, segmentation, analysis, and plotting of Copy Number Segments (CNS). |
2024-12-16 23:53:45 |
| pyobo |
0.11.2 |
A python package for handling and generating OBO |
2024-12-16 15:52:46 |
| open-variant |
1.0.1 |
OpenVariant provides different functionalities to read, parse and operate different multiple input file formats, being able to customize the output. |
2024-12-16 13:02:26 |
| buisciii-tools |
2.2.2 |
Tools for managing and resolution of buisciii services. |
2024-12-16 08:07:07 |
| gutmetrics |
0.1.3 |
Analysis of blood metabolome prediction of gut microbiome α-diversity in humans |
2024-12-15 19:31:01 |
| pykmertools |
0.1.5 |
kmertools is a k-mer based feature extraction tool designed to support metagenomics and other bioinformatics analytics. |
2024-12-13 14:11:46 |
| cpg-flow |
0.1.0a11 |
CPG Flow API for Hail Batch |
2024-12-13 05:05:41 |
| pairtools |
1.1.2 |
CLI tools to process mapped Hi-C data |
2024-12-11 08:28:56 |
| STMiner |
0.0.4 |
Python package for spatial transcriptomics data analysis |
2024-12-11 07:44:47 |
| HopfieldModel |
1.0.1 |
A Python package to model single-cell data using Hopfield networks |
2024-12-11 01:22:28 |
| peptdeep |
1.3.1 |
The AlphaX deep learning framework for Proteomics |
2024-12-10 09:36:57 |
| ProteinStructureVisualizer |
1.0.6 |
A tool for 3D visualization of monomeric protein structures from PDB files |
2024-12-10 02:38:21 |