| Name | Version | Summary | date |
| genome-mcp |
0.2.1 |
Genome MCP server - 优化版本：智能基因组数据访问 |
2025-10-24 12:54:57 |
| protein-mcp |
0.1.5 |
FastMCP-based protein data access tools for bioinformatics research |
2025-10-24 09:25:13 |
| pyjaspar |
4.0.0 |
A Pythonic interface to access different versions of the JASPAR database via Biopython |
2025-10-24 07:53:38 |
| squidly |
0.0.7 |
None |
2025-10-24 01:30:07 |
| deli-chem |
0.1.1 |
DNA encoded library sequence analysis software with custom library design support |
2025-10-23 23:42:47 |
| foldkit |
0.1.1 |
Toolkit for working with AlphaFold3 results and confidence metadata |
2025-10-23 14:52:16 |
| ncbi-tree |
1.0.1 |
ncbi-tree is an open source, cross-platform command-line tool for downloading the latest NCBI taxonomy database and converting it to Newick tree format (.tre), with optional plain-text visualization (.txt) |
2025-10-21 21:51:16 |
| bioql |
5.7.7 |
Enterprise Quantum Computing v5.6.0 - ADVANCED DRUG DISCOVERY PIPELINE: ADME/Tox Prediction, Bioisosteric Replacement (12+ replacements), Similarity Search (ChEMBL/PubChem), Off-Target Screening (30+ proteins), Resistance Profiling, Complete 9-Step Pipeline Orchestrator - Production Ready! |
2025-10-21 04:37:20 |
| DigitalArticle |
0.1.1 |
Command-line tools for Digital Article notebook application |
2025-10-21 02:15:34 |
| cogent3 |
2025.9.8a5 |
COmparative GENomics Toolkit 3: genomic sequence analysis within notebooks or on compute systems with 1000s of CPUs. |
2025-10-20 23:32:58 |
| peppy |
0.40.8 |
A python-based project metadata manager for portable encapsulated projects |
2025-10-20 18:45:21 |
| parquetframe |
1.0.1 |
A universal data processing framework with multi-engine support (pandas, Polars, Dask) and multi-format I/O (CSV, JSON, Parquet, ORC, Avro) with intelligent backend selection |
2025-10-19 18:21:30 |
| pyfurnace |
1.0.3 |
An integrated design engine for RNA origami |
2025-10-18 00:38:28 |
| instanexus |
0.1.0 |
End-to-end workflow for de novo protein sequencing based on InstaNovo |
2025-10-16 13:40:20 |
| pymolfold |
0.2.10 |
Protein structure prediction in PyMOL |
2025-10-15 08:22:32 |
| ngs-ai-agent |
1.0.0 |
AI-powered automated NGS analysis pipeline |
2025-10-14 22:40:46 |
| bioat |
0.16.2 |
bioat, a python package & command line toolkit for Bioinformatics and data science! |
2025-10-14 14:54:29 |
| bio-corgi |
0.5.1 |
Classifier for ORganelle Genomes Inter alia |
2025-10-14 04:15:54 |
| rnapy |
3.2.2 |
Unified RNA Analysis Toolkit - ML-powered RNA sequence analysis and structure prediction |
2025-10-14 01:07:22 |
| hca-smart-sync |
0.3.0 |
Intelligent S3 synchronization for HCA Atlas data |
2025-10-12 23:04:55 |